jebl.evolution.alignments
Class JackknifedAlignment

java.lang.Object
  extended by jebl.evolution.alignments.ResampledAlignment
      extended by jebl.evolution.alignments.JackknifedAlignment
All Implemented Interfaces:
Alignment, Patterns, Sequences

public class JackknifedAlignment
extends ResampledAlignment

Date: 17/01/2006 Time: 08:18:32

Version:
$Id: JackknifedAlignment.java 940 2008-08-26 00:32:47Z stevensh $
Author:
Joseph Heled

Constructor Summary
JackknifedAlignment(Alignment srcAlignment, double percent)
           
JackknifedAlignment(Alignment srcAlignment, double percent, long seed)
           
JackknifedAlignment(Alignment srcAlignment, double percent, java.util.Random r)
           
 
Method Summary
 
Methods inherited from class jebl.evolution.alignments.ResampledAlignment
getPatternCount, getPatternLength, getPatterns, getSequence, getSequenceList, getSequences, getSequenceType, getSiteCount, getTaxa, init
 
Methods inherited from class java.lang.Object
equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

JackknifedAlignment

public JackknifedAlignment(Alignment srcAlignment,
                           double percent)

JackknifedAlignment

public JackknifedAlignment(Alignment srcAlignment,
                           double percent,
                           long seed)

JackknifedAlignment

public JackknifedAlignment(Alignment srcAlignment,
                           double percent,
                           java.util.Random r)


http://code.google.com/p/jebl2/