jebl.evolution.sequences
Class CodonState

java.lang.Object
  extended by jebl.evolution.sequences.State
      extended by jebl.evolution.sequences.CodonState
All Implemented Interfaces:
java.lang.Comparable

public final class CodonState
extends State

As of 2007-07-30, instances of this class are only constructed for non-ambigous nucleotide triplets - see Codons.

Version:
$Id: CodonState.java 810 2007-10-12 00:40:45Z twobeers $
Author:
Andrew Rambaut, Alexei Drummond

Method Summary
 boolean isGap()
           
 
Methods inherited from class jebl.evolution.sequences.State
compareTo, fractionEqual, getCanonicalStates, getCode, getFullName, getIndex, getName, isAmbiguous, possiblyEqual, toString
 
Methods inherited from class java.lang.Object
equals, getClass, hashCode, notify, notifyAll, wait, wait, wait
 

Method Detail

isGap

public boolean isGap()
Specified by:
isGap in class State


http://code.google.com/p/jebl2/