Package jebl.evolution.coalescent

Interface Summary
DemographicFunction This interface provides methods that describe a demographic function.
IntervalList An interface for a set of coalescent intevals.
 

Class Summary
CataclysmicDemographic This class models an exponentially growing (or shrinking) population (Parameters: N0=present-day population size; r=growth rate).
Coalescent A likelihood function for the coalescent.
ConstantPopulation This class models coalescent intervals for a constant population (parameter: N0=present-day population size).
ConstExponential This class models exponential growth from an initial population size.
ConstLogistic This class models logistic growth from an initial population size.
DemographicFunction.Utils  
EmpiricalDemographicFunction  
Expansion This class models exponential growth from an initial ancestral population size.
ExponentialGrowth This class models an exponentially growing (or shrinking) population (Parameters: N0=present-day population size; r=growth rate).
ExponentialLogistic This class models logistic growth from an initial exponential phase.
IntervalList.Utils  
Intervals A concrete class for a set of coalescent intevals.
LogisticGrowth This class models logistic growth.
 

Enum Summary
IntervalList.IntervalType  
 



http://code.google.com/p/jebl2/